Cluster: Rep_2233_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2233
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2233_c_9 | Rep_2233_c_9_15 | 12916 | 13983 | + | 3.A.1.6.2 |
| pfam | Rep_2233_c_9 | Rep_2233_c_9_16 | 14123 | 14809 | + | BPD_transp_1 |
| TC | Rep_2233_c_9 | Rep_2233_c_9_17 | 14806 | 15453 | + | 3.A.1.6.2 |
| NULL(UNKNOWN) | Rep_2233_c_9 | Rep_2233_c_9_18 | 15876 | 16070 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2233_c_9 | Rep_2233_c_9_19 | 16075 | 18336 | - | GT35 |
Gene ID: Rep_2233_c_9_15
Type: TC
Location: 12916 - 13983 (+)
Type: TC
Location: 12916 - 13983 (+)
Gene ID: Rep_2233_c_9_16
Type: pfam
Location: 14123 - 14809 (+)
Type: pfam
Location: 14123 - 14809 (+)
Gene ID: Rep_2233_c_9_17
Type: TC
Location: 14806 - 15453 (+)
Type: TC
Location: 14806 - 15453 (+)
Gene ID: Rep_2233_c_9_18
Type:
Location: 15876 - 16070 (+)
Type:
Location: 15876 - 16070 (+)
Gene ID: Rep_2233_c_9_19
Type: CAZyme
Location: 16075 - 18336 (-)
Type: CAZyme
Location: 16075 - 18336 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominiventricola
Species
Hominiventricola sp018223365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2233_c_9_17 | vegetarian > vegan | 1.00836 | 0.01274 |