Cluster: Rep_2233_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2233
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2233_c_8 | Rep_2233_c_8_40 | 36671 | 38494 | + | 3.A.16.1.1 |
| CAZyme | Rep_2233_c_8 | Rep_2233_c_8_41 | 38767 | 40821 | + | GH13_39 |
| pfam | Rep_2233_c_8 | Rep_2233_c_8_42 | 40979 | 42574 | + | FGGY_N | FGGY_C |
| CAZyme | Rep_2233_c_8 | Rep_2233_c_8_43 | 42669 | 44342 | + | GH13_31 |
Gene ID: Rep_2233_c_8_40
Type: TC
Location: 36671 - 38494 (+)
Type: TC
Location: 36671 - 38494 (+)
Gene ID: Rep_2233_c_8_41
Type: CAZyme
Location: 38767 - 40821 (+)
Type: CAZyme
Location: 38767 - 40821 (+)
Gene ID: Rep_2233_c_8_42
Type: pfam
Location: 40979 - 42574 (+)
Type: pfam
Location: 40979 - 42574 (+)
Gene ID: Rep_2233_c_8_43
Type: CAZyme
Location: 42669 - 44342 (+)
Type: CAZyme
Location: 42669 - 44342 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominiventricola
Species
Hominiventricola sp018223365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2233_c_8_43 | vegetarian > vegan | 1.04812 | 0.01054 |