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Cluster: Rep_2233_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2233_c_7 Rep_2233_c_7_6 11006 13960 + GH25
TC Rep_2233_c_7 Rep_2233_c_7_7 14097 15521 + 9.B.18.1.2
NULL(UNKNOWN) Rep_2233_c_7 Rep_2233_c_7_8 15534 16982 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2233_c_7 Rep_2233_c_7_9 16997 17824 + GT111
pfam Rep_2233_c_7 Rep_2233_c_7_10 17826 18863 + Acyl_transf_3
CAZyme Rep_2233_c_7 Rep_2233_c_7_11 18898 19872 + GT2
pfam Rep_2233_c_7 Rep_2233_c_7_12 19883 20866 + Stealth_CR2 | Stealth_CR1
CAZyme Rep_2233_c_7 Rep_2233_c_7_13 20875 21981 + GT4
CAZyme Rep_2233_c_7 Rep_2233_c_7_14 21974 22876 + GT2
NULL(UNKNOWN) Rep_2233_c_7 Rep_2233_c_7_15 22923 24056 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2233_c_7 Rep_2233_c_7_16 24060 25523 + 2.A.66.2.16
Gene ID: Rep_2233_c_7_6
Type: CAZyme
Location: 11006 - 13960 (+)
Gene ID: Rep_2233_c_7_7
Type: TC
Location: 14097 - 15521 (+)
Gene ID: Rep_2233_c_7_8
Type:
Location: 15534 - 16982 (+)
Gene ID: Rep_2233_c_7_9
Type: CAZyme
Location: 16997 - 17824 (+)
Gene ID: Rep_2233_c_7_10
Type: pfam
Location: 17826 - 18863 (+)
Gene ID: Rep_2233_c_7_11
Type: CAZyme
Location: 18898 - 19872 (+)
Gene ID: Rep_2233_c_7_12
Type: pfam
Location: 19883 - 20866 (+)
Gene ID: Rep_2233_c_7_13
Type: CAZyme
Location: 20875 - 21981 (+)
Gene ID: Rep_2233_c_7_14
Type: CAZyme
Location: 21974 - 22876 (+)
Gene ID: Rep_2233_c_7_15
Type:
Location: 22923 - 24056 (+)
Gene ID: Rep_2233_c_7_16
Type: TC
Location: 24060 - 25523 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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