Cluster: Rep_2224_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2224
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2224_c_38 | Rep_2224_c_38_2 | 644 | 1723 | - | GT2 |
| TC | Rep_2224_c_38 | Rep_2224_c_38_3 | 1964 | 2866 | - | 1.A.23.4.2 |
| STP | Rep_2224_c_38 | Rep_2224_c_38_4 | 3049 | 4725 | - | EAL | GGDEF | PAS |
| CAZyme | Rep_2224_c_38 | Rep_2224_c_38_5 | 4879 | 6510 | - | GH26 |
| CAZyme | Rep_2224_c_38 | Rep_2224_c_38_6 | 6507 | 7586 | - | CE1 |
Gene ID: Rep_2224_c_38_2
Type: CAZyme
Location: 644 - 1723 (-)
Type: CAZyme
Location: 644 - 1723 (-)
Gene ID: Rep_2224_c_38_3
Type: TC
Location: 1964 - 2866 (-)
Type: TC
Location: 1964 - 2866 (-)
Gene ID: Rep_2224_c_38_4
Type: STP
Location: 3049 - 4725 (-)
Type: STP
Location: 3049 - 4725 (-)
Gene ID: Rep_2224_c_38_5
Type: CAZyme
Location: 4879 - 6510 (-)
Type: CAZyme
Location: 4879 - 6510 (-)
Gene ID: Rep_2224_c_38_6
Type: CAZyme
Location: 6507 - 7586 (-)
Type: CAZyme
Location: 6507 - 7586 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA4292
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.