Cluster: Rep_2224_CGC35
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2224
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2224_c_170 | Rep_2224_c_170_7 | 8645 | 9484 | + | 3.A.1.134.3 |
| pfam | Rep_2224_c_170 | Rep_2224_c_170_8 | 9496 | 11751 | + | FtsX |
| CAZyme | Rep_2224_c_170 | Rep_2224_c_170_9 | 11885 | 13117 | + | GH5_4 |
| NULL(UNKNOWN) | Rep_2224_c_170 | Rep_2224_c_170_10 | 13142 | 13336 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_2224_c_170 | Rep_2224_c_170_11 | 13521 | 13988 | + | MarR |
| TC | Rep_2224_c_170 | Rep_2224_c_170_12 | 13982 | 15772 | + | 3.A.1.135.5 |
| TC | Rep_2224_c_170 | Rep_2224_c_170_13 | 15772 | 17676 | + | 3.A.1.135.5 |
Gene ID: Rep_2224_c_170_7
Type: TC
Location: 8645 - 9484 (+)
Type: TC
Location: 8645 - 9484 (+)
Gene ID: Rep_2224_c_170_8
Type: pfam
Location: 9496 - 11751 (+)
Type: pfam
Location: 9496 - 11751 (+)
Gene ID: Rep_2224_c_170_9
Type: CAZyme
Location: 11885 - 13117 (+)
Type: CAZyme
Location: 11885 - 13117 (+)
Gene ID: Rep_2224_c_170_10
Type:
Location: 13142 - 13336 (+)
Type:
Location: 13142 - 13336 (+)
Gene ID: Rep_2224_c_170_11
Type: TF
Location: 13521 - 13988 (+)
Type: TF
Location: 13521 - 13988 (+)
Gene ID: Rep_2224_c_170_12
Type: TC
Location: 13982 - 15772 (+)
Type: TC
Location: 13982 - 15772 (+)
Gene ID: Rep_2224_c_170_13
Type: TC
Location: 15772 - 17676 (+)
Type: TC
Location: 15772 - 17676 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA4292
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.