Cluster: Rep_2224_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2224
- CGC Family ID: CGCFAM_00074
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2224_c_134 | Rep_2224_c_134_10 | 9351 | 10772 | - | 9.B.18.1.1 |
| CAZyme | Rep_2224_c_134 | Rep_2224_c_134_11 | 10908 | 11894 | - | GT2 |
| TC | Rep_2224_c_134 | Rep_2224_c_134_12 | 11898 | 12641 | - | 3.A.1.103.1 |
| pfam | Rep_2224_c_134 | Rep_2224_c_134_13 | 12716 | 13522 | - | ABC2_membrane |
| pfam | Rep_2224_c_134 | Rep_2224_c_134_14 | 13524 | 14114 | - | dTDP_sugar_isom |
| CAZyme | Rep_2224_c_134 | Rep_2224_c_134_15 | 14268 | 15197 | - | GT2 |
Gene ID: Rep_2224_c_134_10
Type: TC
Location: 9351 - 10772 (-)
Type: TC
Location: 9351 - 10772 (-)
Gene ID: Rep_2224_c_134_11
Type: CAZyme
Location: 10908 - 11894 (-)
Type: CAZyme
Location: 10908 - 11894 (-)
Gene ID: Rep_2224_c_134_12
Type: TC
Location: 11898 - 12641 (-)
Type: TC
Location: 11898 - 12641 (-)
Gene ID: Rep_2224_c_134_13
Type: pfam
Location: 12716 - 13522 (-)
Type: pfam
Location: 12716 - 13522 (-)
Gene ID: Rep_2224_c_134_14
Type: pfam
Location: 13524 - 14114 (-)
Type: pfam
Location: 13524 - 14114 (-)
Gene ID: Rep_2224_c_134_15
Type: CAZyme
Location: 14268 - 15197 (-)
Type: CAZyme
Location: 14268 - 15197 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA4292
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.