Cluster: Rep_2224_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2224
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2224_c_7 | Rep_2224_c_7_60 | 60922 | 62787 | + | 3.A.3.6.10 |
| pfam | Rep_2224_c_7 | Rep_2224_c_7_61 | 62901 | 63617 | + | Bax1-I |
| pfam | Rep_2224_c_7 | Rep_2224_c_7_62 | 63686 | 64483 | - | BPD_transp_1 |
| TC | Rep_2224_c_7 | Rep_2224_c_7_63 | 64467 | 65243 | - | 3.A.1.17.8 |
| NULL(UNKNOWN) | Rep_2224_c_7 | Rep_2224_c_7_64 | 65468 | 66523 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2224_c_7 | Rep_2224_c_7_65 | 66861 | 68879 | + | CotH | Fn3_assoc | CHB_HEX_C_1 |
| CAZyme | Rep_2224_c_7 | Rep_2224_c_7_66 | 68894 | 70210 | + | GH43_35 |
Gene ID: Rep_2224_c_7_60
Type: TC
Location: 60922 - 62787 (+)
Type: TC
Location: 60922 - 62787 (+)
Gene ID: Rep_2224_c_7_61
Type: pfam
Location: 62901 - 63617 (+)
Type: pfam
Location: 62901 - 63617 (+)
Gene ID: Rep_2224_c_7_62
Type: pfam
Location: 63686 - 64483 (-)
Type: pfam
Location: 63686 - 64483 (-)
Gene ID: Rep_2224_c_7_63
Type: TC
Location: 64467 - 65243 (-)
Type: TC
Location: 64467 - 65243 (-)
Gene ID: Rep_2224_c_7_64
Type:
Location: 65468 - 66523 (-)
Type:
Location: 65468 - 66523 (-)
Gene ID: Rep_2224_c_7_65
Type: pfam
Location: 66861 - 68879 (+)
Type: pfam
Location: 66861 - 68879 (+)
Gene ID: Rep_2224_c_7_66
Type: CAZyme
Location: 68894 - 70210 (+)
Type: CAZyme
Location: 68894 - 70210 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA4292
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.