Cluster: Rep_2224_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2224
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2224_c_128 | Rep_2224_c_128_11 | 9936 | 11594 | + | GT2 |
| STP | Rep_2224_c_128 | Rep_2224_c_128_12 | 11616 | 12953 | + | HD |
| pfam | Rep_2224_c_128 | Rep_2224_c_128_13 | 13018 | 13437 | + | PrcB_C |
| TC | Rep_2224_c_128 | Rep_2224_c_128_14 | 13556 | 14056 | - | 1.A.22.1.8 |
Gene ID: Rep_2224_c_128_11
Type: CAZyme
Location: 9936 - 11594 (+)
Type: CAZyme
Location: 9936 - 11594 (+)
Gene ID: Rep_2224_c_128_12
Type: STP
Location: 11616 - 12953 (+)
Type: STP
Location: 11616 - 12953 (+)
Gene ID: Rep_2224_c_128_13
Type: pfam
Location: 13018 - 13437 (+)
Type: pfam
Location: 13018 - 13437 (+)
Gene ID: Rep_2224_c_128_14
Type: TC
Location: 13556 - 14056 (-)
Type: TC
Location: 13556 - 14056 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA4292
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.