Cluster: Rep_2224_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2224
- CGC Family ID: CGCFAM_07132
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2224_c_79 | Rep_2224_c_79_12 | 12271 | 12933 | + | 3.A.1.122.2 |
| CAZyme | Rep_2224_c_79 | Rep_2224_c_79_13 | 13067 | 15499 | - | GH94 |
| TF | Rep_2224_c_79 | Rep_2224_c_79_14 | 16078 | 17103 | + | LacI |
| NULL(UNKNOWN) | Rep_2224_c_79 | Rep_2224_c_79_15 | 17265 | 18677 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2224_c_79 | Rep_2224_c_79_16 | 18822 | 19772 | + | 3.A.1.1.4 |
| TC | Rep_2224_c_79 | Rep_2224_c_79_17 | 19786 | 20661 | + | 3.A.1.1.36 |
| TC | Rep_2224_c_79 | Rep_2224_c_79_18 | 20887 | 21648 | + | 9.B.28.1.2 |
Gene ID: Rep_2224_c_79_12
Type: TC
Location: 12271 - 12933 (+)
Type: TC
Location: 12271 - 12933 (+)
Gene ID: Rep_2224_c_79_13
Type: CAZyme
Location: 13067 - 15499 (-)
Type: CAZyme
Location: 13067 - 15499 (-)
Gene ID: Rep_2224_c_79_14
Type: TF
Location: 16078 - 17103 (+)
Type: TF
Location: 16078 - 17103 (+)
Gene ID: Rep_2224_c_79_15
Type:
Location: 17265 - 18677 (+)
Type:
Location: 17265 - 18677 (+)
Gene ID: Rep_2224_c_79_16
Type: TC
Location: 18822 - 19772 (+)
Type: TC
Location: 18822 - 19772 (+)
Gene ID: Rep_2224_c_79_17
Type: TC
Location: 19786 - 20661 (+)
Type: TC
Location: 19786 - 20661 (+)
Gene ID: Rep_2224_c_79_18
Type: TC
Location: 20887 - 21648 (+)
Type: TC
Location: 20887 - 21648 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA4292
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.