Cluster: Rep_2224_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2224
- CGC Family ID: CGCFAM_00619
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2224_c_72 | Rep_2224_c_72_24 | 20238 | 21767 | + | 3.A.1.11.8 |
| TC | Rep_2224_c_72 | Rep_2224_c_72_25 | 21820 | 22605 | + | 3.A.1.11.8 |
| TC | Rep_2224_c_72 | Rep_2224_c_72_26 | 22602 | 23402 | + | 3.A.1.11.7 |
| TC | Rep_2224_c_72 | Rep_2224_c_72_27 | 23399 | 24862 | + | 3.A.1.11.7 |
| CAZyme | Rep_2224_c_72 | Rep_2224_c_72_28 | 24933 | 27317 | - | GH74 |
Gene ID: Rep_2224_c_72_24
Type: TC
Location: 20238 - 21767 (+)
Type: TC
Location: 20238 - 21767 (+)
Gene ID: Rep_2224_c_72_25
Type: TC
Location: 21820 - 22605 (+)
Type: TC
Location: 21820 - 22605 (+)
Gene ID: Rep_2224_c_72_26
Type: TC
Location: 22602 - 23402 (+)
Type: TC
Location: 22602 - 23402 (+)
Gene ID: Rep_2224_c_72_27
Type: TC
Location: 23399 - 24862 (+)
Type: TC
Location: 23399 - 24862 (+)
Gene ID: Rep_2224_c_72_28
Type: CAZyme
Location: 24933 - 27317 (-)
Type: CAZyme
Location: 24933 - 27317 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA4292
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.