Cluster: Rep_2224_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2224
- CGC Family ID: CGCFAM_10210
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2224_c_65 | Rep_2224_c_65_24 | 23739 | 25082 | + | GT2 |
| pfam | Rep_2224_c_65 | Rep_2224_c_65_25 | 25191 | 25883 | - | PNP_UDP_1 |
| TC | Rep_2224_c_65 | Rep_2224_c_65_26 | 25906 | 27768 | - | 3.A.1.106.3 |
| TC | Rep_2224_c_65 | Rep_2224_c_65_27 | 27765 | 29558 | - | 3.A.1.106.8 |
Gene ID: Rep_2224_c_65_24
Type: CAZyme
Location: 23739 - 25082 (+)
Type: CAZyme
Location: 23739 - 25082 (+)
Gene ID: Rep_2224_c_65_25
Type: pfam
Location: 25191 - 25883 (-)
Type: pfam
Location: 25191 - 25883 (-)
Gene ID: Rep_2224_c_65_26
Type: TC
Location: 25906 - 27768 (-)
Type: TC
Location: 25906 - 27768 (-)
Gene ID: Rep_2224_c_65_27
Type: TC
Location: 27765 - 29558 (-)
Type: TC
Location: 27765 - 29558 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA4292
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.