Cluster: Rep_2224_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2224
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2224_c_58 | Rep_2224_c_58_14 | 15597 | 16490 | - | 3.A.1.1.39 |
| TC | Rep_2224_c_58 | Rep_2224_c_58_15 | 16492 | 17427 | - | 3.A.1.1.11 |
| STP | Rep_2224_c_58 | Rep_2224_c_58_16 | 17442 | 20417 | - | SBP_bac_1 |
| TC | Rep_2224_c_58 | Rep_2224_c_58_17 | 20498 | 21142 | - | 9.B.28.1.8 |
| CAZyme | Rep_2224_c_58 | Rep_2224_c_58_18 | 21158 | 22759 | - | CBM35 | GH26 |
Gene ID: Rep_2224_c_58_14
Type: TC
Location: 15597 - 16490 (-)
Type: TC
Location: 15597 - 16490 (-)
Gene ID: Rep_2224_c_58_15
Type: TC
Location: 16492 - 17427 (-)
Type: TC
Location: 16492 - 17427 (-)
Gene ID: Rep_2224_c_58_16
Type: STP
Location: 17442 - 20417 (-)
Type: STP
Location: 17442 - 20417 (-)
Gene ID: Rep_2224_c_58_17
Type: TC
Location: 20498 - 21142 (-)
Type: TC
Location: 20498 - 21142 (-)
Gene ID: Rep_2224_c_58_18
Type: CAZyme
Location: 21158 - 22759 (-)
Type: CAZyme
Location: 21158 - 22759 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA4292
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.