Cluster: Rep_2224_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2224
- CGC Family ID: CGCFAM_08739
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2224_c_55 | Rep_2224_c_55_2 | 873 | 1772 | + | 8.A.5.1.7 |
| pfam | Rep_2224_c_55 | Rep_2224_c_55_3 | 1780 | 2958 | + | LacY_symp | Nuc_H_symport | MFS_1 | MFS_1_like |
| CAZyme | Rep_2224_c_55 | Rep_2224_c_55_4 | 3055 | 5190 | + | GH3 |
Gene ID: Rep_2224_c_55_2
Type: TC
Location: 873 - 1772 (+)
Type: TC
Location: 873 - 1772 (+)
Gene ID: Rep_2224_c_55_3
Type: pfam
Location: 1780 - 2958 (+)
Type: pfam
Location: 1780 - 2958 (+)
Gene ID: Rep_2224_c_55_4
Type: CAZyme
Location: 3055 - 5190 (+)
Type: CAZyme
Location: 3055 - 5190 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA4292
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.