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Cluster: Rep_220_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_220_c_108 Rep_220_c_108_1 71 1135 + GH53
CAZyme Rep_220_c_108 Rep_220_c_108_2 1252 3249 + GH13_6
TC Rep_220_c_108 Rep_220_c_108_3 3385 3837 + 9.B.20.1.4
pfam Rep_220_c_108 Rep_220_c_108_4 3927 4331 - Ig_mannosidase
CAZyme Rep_220_c_108 Rep_220_c_108_5 4447 6654 - GH36
pfam Rep_220_c_108 Rep_220_c_108_6 6762 7112 - Glyco_hydro_95_C
TC Rep_220_c_108 Rep_220_c_108_7 7433 8689 - 2.A.1.7.5
CAZyme Rep_220_c_108 Rep_220_c_108_8 8807 10078 - GH53
Gene ID: Rep_220_c_108_1
Type: CAZyme
Location: 71 - 1135 (+)
Gene ID: Rep_220_c_108_2
Type: CAZyme
Location: 1252 - 3249 (+)
Gene ID: Rep_220_c_108_3
Type: TC
Location: 3385 - 3837 (+)
Gene ID: Rep_220_c_108_4
Type: pfam
Location: 3927 - 4331 (-)
Gene ID: Rep_220_c_108_5
Type: CAZyme
Location: 4447 - 6654 (-)
Gene ID: Rep_220_c_108_6
Type: pfam
Location: 6762 - 7112 (-)
Gene ID: Rep_220_c_108_7
Type: TC
Location: 7433 - 8689 (-)
Gene ID: Rep_220_c_108_8
Type: CAZyme
Location: 8807 - 10078 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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