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Cluster: Rep_220_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_220_c_21 Rep_220_c_21_2 408 2888 + GH31_4
pfam Rep_220_c_21 Rep_220_c_21_3 3295 6228 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1_2
TC Rep_220_c_21 Rep_220_c_21_4 6235 7167 + 2.A.115.1.5
sulfatase Rep_220_c_21 Rep_220_c_21_5 7175 7795 + S1_7
CAZyme Rep_220_c_21 Rep_220_c_21_6 7785 8681 + GT2
pfam Rep_220_c_21 Rep_220_c_21_7 8678 10690 + Reg_prop | PorZ_N_b_propeller
NULL(UNKNOWN) Rep_220_c_21 Rep_220_c_21_8 10687 11925 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_220_c_21 Rep_220_c_21_9 12077 12988 + GT2
pfam Rep_220_c_21 Rep_220_c_21_10 13002 14054 + Acyl_transf_3
pfam Rep_220_c_21 Rep_220_c_21_11 14237 16117 - AAA_11 | AAA_12 | AAA_19 | AAA_30
TC Rep_220_c_21 Rep_220_c_21_12 16157 16894 + 3.A.1.13.2
Gene ID: Rep_220_c_21_2
Type: CAZyme
Location: 408 - 2888 (+)
Gene ID: Rep_220_c_21_3
Type: pfam
Location: 3295 - 6228 (+)
Gene ID: Rep_220_c_21_4
Type: TC
Location: 6235 - 7167 (+)
Gene ID: Rep_220_c_21_5
Type: sulfatase
Location: 7175 - 7795 (+)
Gene ID: Rep_220_c_21_6
Type: CAZyme
Location: 7785 - 8681 (+)
Gene ID: Rep_220_c_21_7
Type: pfam
Location: 8678 - 10690 (+)
Gene ID: Rep_220_c_21_8
Type:
Location: 10687 - 11925 (-)
Gene ID: Rep_220_c_21_9
Type: CAZyme
Location: 12077 - 12988 (+)
Gene ID: Rep_220_c_21_10
Type: pfam
Location: 13002 - 14054 (+)
Gene ID: Rep_220_c_21_11
Type: pfam
Location: 14237 - 16117 (-)
Gene ID: Rep_220_c_21_12
Type: TC
Location: 16157 - 16894 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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