dbCAN HGM

Cluster: Rep_2208_CGC54

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_2208_c_49	Rep_2208_c_49_2	2703	4658	-	GH120
NULL(UNKNOWN)	Rep_2208_c_49	Rep_2208_c_49_3	4784	6559	-	NULL(UNKNOWN) [View Structural Homologs]
TC	Rep_2208_c_49	Rep_2208_c_49_4	6632	7561	-	3.A.1.1.29
TC	Rep_2208_c_49	Rep_2208_c_49_5	7574	8497	-	3.A.1.1.29
TF	Rep_2208_c_49	Rep_2208_c_49_6	8770	9807	-	LacI
NULL(UNKNOWN)	Rep_2208_c_49	Rep_2208_c_49_7	9932	10129	-	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	Rep_2208_c_49	Rep_2208_c_49_8	10129	11256	-	GH27

Gene ID: Rep_2208_c_49_2
Type: CAZyme
Location: 2703 - 4658 (-)

Gene ID: Rep_2208_c_49_3
Type:
Location: 4784 - 6559 (-)

Gene ID: Rep_2208_c_49_4
Type: TC
Location: 6632 - 7561 (-)

Gene ID: Rep_2208_c_49_5
Type: TC
Location: 7574 - 8497 (-)

Gene ID: Rep_2208_c_49_6
Type: TF
Location: 8770 - 9807 (-)

Gene ID: Rep_2208_c_49_7
Type:
Location: 9932 - 10129 (-)

Gene ID: Rep_2208_c_49_8
Type: CAZyme
Location: 10129 - 11256 (-)

Taxonomic Lineage

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Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_2208_c_49_4	vegetarian > vegan	1.08587	0.00052
Rep_2208_c_49_5	vegetarian > omnivore	1.02324	0.00588
Rep_2208_c_49_6	vegetarian > vegan	1.27410	0.00052
Rep_2208_c_49_7	vegetarian > vegan	1.53648	0.00052
Rep_2208_c_49_8	vegetarian > vegan	1.94737	0.00052