Cluster: Rep_2208_CGC52
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2208
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2208_c_48 | Rep_2208_c_48_1 | 160 | 1461 | - | 2.A.56.1.5 |
| pfam | Rep_2208_c_48 | Rep_2208_c_48_2 | 1473 | 1964 | - | DctQ |
| TC | Rep_2208_c_48 | Rep_2208_c_48_3 | 1968 | 3011 | - | 2.A.56.1.1 |
| CAZyme | Rep_2208_c_48 | Rep_2208_c_48_4 | 3051 | 5564 | - | GH31_2 |
Gene ID: Rep_2208_c_48_1
Type: TC
Location: 160 - 1461 (-)
Type: TC
Location: 160 - 1461 (-)
Gene ID: Rep_2208_c_48_2
Type: pfam
Location: 1473 - 1964 (-)
Type: pfam
Location: 1473 - 1964 (-)
Gene ID: Rep_2208_c_48_3
Type: TC
Location: 1968 - 3011 (-)
Type: TC
Location: 1968 - 3011 (-)
Gene ID: Rep_2208_c_48_4
Type: CAZyme
Location: 3051 - 5564 (-)
Type: CAZyme
Location: 3051 - 5564 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Suilimivivens
Species
Suilimivivens sp000438155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.