dbCAN HGM

Cluster: Rep_2208_CGC48

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_2208_c_41	Rep_2208_c_41_13	13353	14744	-	9.B.18.1.3
CAZyme	Rep_2208_c_41	Rep_2208_c_41_14	14812	15741	-	GT2
peptidase	Rep_2208_c_41	Rep_2208_c_41_15	15993	16532	-	A08.UPW
TC	Rep_2208_c_41	Rep_2208_c_41_16	16664	17497	-	3.A.1.29.1
TC	Rep_2208_c_41	Rep_2208_c_41_17	17490	19223	-	3.A.1.29.1
TC	Rep_2208_c_41	Rep_2208_c_41_18	19348	19890	-	3.A.1.29.1

Gene ID: Rep_2208_c_41_13
Type: TC
Location: 13353 - 14744 (-)

Gene ID: Rep_2208_c_41_14
Type: CAZyme
Location: 14812 - 15741 (-)

Gene ID: Rep_2208_c_41_15
Type: peptidase
Location: 15993 - 16532 (-)

Gene ID: Rep_2208_c_41_16
Type: TC
Location: 16664 - 17497 (-)

Gene ID: Rep_2208_c_41_17
Type: TC
Location: 17490 - 19223 (-)

Gene ID: Rep_2208_c_41_18
Type: TC
Location: 19348 - 19890 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_2208_c_41_14	vegetarian > vegan	1.21822	0.00052
Rep_2208_c_41_15	vegetarian > omnivore	1.54724	0.00588
Rep_2208_c_41_15	vegetarian > vegan	1.96576	0.00052
Rep_2208_c_41_16	vegetarian > vegan	2.06363	0.00052
Rep_2208_c_41_18	vegetarian > vegan	3.38157	0.00052