Cluster: Rep_2208_CGC45
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2208
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2208_c_35 | Rep_2208_c_35_2 | 1359 | 2429 | + | 9.B.34.1.2 |
| sulfatase | Rep_2208_c_35 | Rep_2208_c_35_3 | 2575 | 4155 | + | S1_2 |
| NULL(UNKNOWN) | Rep_2208_c_35 | Rep_2208_c_35_4 | 4378 | 5130 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2208_c_35 | Rep_2208_c_35_5 | 5136 | 7193 | + | GT39 |
Gene ID: Rep_2208_c_35_2
Type: TC
Location: 1359 - 2429 (+)
Type: TC
Location: 1359 - 2429 (+)
Gene ID: Rep_2208_c_35_3
Type: sulfatase
Location: 2575 - 4155 (+)
Type: sulfatase
Location: 2575 - 4155 (+)
Gene ID: Rep_2208_c_35_4
Type:
Location: 4378 - 5130 (+)
Type:
Location: 4378 - 5130 (+)
Gene ID: Rep_2208_c_35_5
Type: CAZyme
Location: 5136 - 7193 (+)
Type: CAZyme
Location: 5136 - 7193 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Suilimivivens
Species
Suilimivivens sp000438155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2208_c_35_2 | vegetarian > vegan | 1.74516 | 0.00052 |
| Rep_2208_c_35_5 | vegetarian > vegan | 2.99299 | 0.00052 |