dbCAN HGM

Cluster: Rep_2208_CGC44

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_2208_c_31	Rep_2208_c_31_14	15823	18411	+	GH2
TC	Rep_2208_c_31	Rep_2208_c_31_15	18515	19942	+	2.A.2.1.1
CAZyme	Rep_2208_c_31	Rep_2208_c_31_16	19939	22323	+	GH36
pfam	Rep_2208_c_31	Rep_2208_c_31_17	22379	22837	+	Coat_F
CAZyme	Rep_2208_c_31	Rep_2208_c_31_18	23148	23759	+	GH172
CAZyme	Rep_2208_c_31	Rep_2208_c_31_19	23805	25340	+	GH32

Gene ID: Rep_2208_c_31_14
Type: CAZyme
Location: 15823 - 18411 (+)

Gene ID: Rep_2208_c_31_15
Type: TC
Location: 18515 - 19942 (+)

Gene ID: Rep_2208_c_31_16
Type: CAZyme
Location: 19939 - 22323 (+)

Gene ID: Rep_2208_c_31_17
Type: pfam
Location: 22379 - 22837 (+)

Gene ID: Rep_2208_c_31_18
Type: CAZyme
Location: 23148 - 23759 (+)

Gene ID: Rep_2208_c_31_19
Type: CAZyme
Location: 23805 - 25340 (+)

Taxonomic Lineage

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Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_2208_c_31_14	vegetarian > omnivore	1.25675	0.00588
Rep_2208_c_31_14	vegetarian > vegan	1.67757	0.00052
Rep_2208_c_31_16	vegetarian > omnivore	1.27671	0.00588
Rep_2208_c_31_16	vegetarian > vegan	1.99219	0.00052
Rep_2208_c_31_17	vegetarian > omnivore	1.23257	0.00588
Rep_2208_c_31_17	vegetarian > vegan	1.60891	0.00052
Rep_2208_c_31_18	vegetarian > vegan	1.14346	0.00052
Rep_2208_c_31_19	vegetarian > vegan	1.88237	0.00052

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_2208_c_31_19	vegan > omnivore	2.06664	0.02677