Cluster: Rep_2208_CGC42
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2208
- CGC Family ID: CGCFAM_07015
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2208_c_28 | Rep_2208_c_28_41 | 36862 | 37851 | - | 8.A.5.1.3 |
| NULL(UNKNOWN) | Rep_2208_c_28 | Rep_2208_c_28_42 | 38037 | 38204 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2208_c_28 | Rep_2208_c_28_43 | 38326 | 40887 | + | GH9 |
Gene ID: Rep_2208_c_28_41
Type: TC
Location: 36862 - 37851 (-)
Type: TC
Location: 36862 - 37851 (-)
Gene ID: Rep_2208_c_28_42
Type:
Location: 38037 - 38204 (+)
Type:
Location: 38037 - 38204 (+)
Gene ID: Rep_2208_c_28_43
Type: CAZyme
Location: 38326 - 40887 (+)
Type: CAZyme
Location: 38326 - 40887 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Suilimivivens
Species
Suilimivivens sp000438155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2208_c_28_42 | vegetarian > vegan | 1.94230 | 0.00052 |
| Rep_2208_c_28_43 | vegetarian > vegan | 1.07644 | 0.00052 |