dbCAN HGM

Cluster: Rep_2208_CGC40

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_2208_c_26	Rep_2208_c_26_5	5528	6091	+	2.A.51.1.6
CAZyme	Rep_2208_c_26	Rep_2208_c_26_6	6117	7178	+	GT2
STP	Rep_2208_c_26	Rep_2208_c_26_7	7266	7841	+	Pribosyltran
pfam	Rep_2208_c_26	Rep_2208_c_26_8	7948	9273	+	Bmp
TC	Rep_2208_c_26	Rep_2208_c_26_9	9404	10945	+	3.A.1.2.17
TC	Rep_2208_c_26	Rep_2208_c_26_10	10929	12032	+	3.A.1.2.12

Gene ID: Rep_2208_c_26_5
Type: TC
Location: 5528 - 6091 (+)

Gene ID: Rep_2208_c_26_6
Type: CAZyme
Location: 6117 - 7178 (+)

Gene ID: Rep_2208_c_26_7
Type: STP
Location: 7266 - 7841 (+)

Gene ID: Rep_2208_c_26_8
Type: pfam
Location: 7948 - 9273 (+)

Gene ID: Rep_2208_c_26_9
Type: TC
Location: 9404 - 10945 (+)

Gene ID: Rep_2208_c_26_10
Type: TC
Location: 10929 - 12032 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_2208_c_26_5	vegetarian > omnivore	1.27054	0.00588
Rep_2208_c_26_5	vegetarian > vegan	2.28472	0.00052
Rep_2208_c_26_6	vegetarian > omnivore	1.25267	0.00588
Rep_2208_c_26_6	vegetarian > vegan	2.36381	0.00052
Rep_2208_c_26_7	vegetarian > omnivore	1.09997	0.00588
Rep_2208_c_26_7	vegetarian > vegan	1.20137	0.00052
Rep_2208_c_26_9	vegetarian > vegan	1.03294	0.00052