Cluster: Rep_2208_CGC34
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2208
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2208_c_19 | Rep_2208_c_19_23 | 27718 | 29241 | + | 2.A.35.2.1 |
| pfam | Rep_2208_c_19 | Rep_2208_c_19_24 | 29475 | 30275 | - | MecA |
| NULL(UNKNOWN) | Rep_2208_c_19 | Rep_2208_c_19_25 | 31155 | 31421 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2208_c_19 | Rep_2208_c_19_26 | 31540 | 33237 | + | GH18 |
Gene ID: Rep_2208_c_19_23
Type: TC
Location: 27718 - 29241 (+)
Type: TC
Location: 27718 - 29241 (+)
Gene ID: Rep_2208_c_19_24
Type: pfam
Location: 29475 - 30275 (-)
Type: pfam
Location: 29475 - 30275 (-)
Gene ID: Rep_2208_c_19_25
Type:
Location: 31155 - 31421 (+)
Type:
Location: 31155 - 31421 (+)
Gene ID: Rep_2208_c_19_26
Type: CAZyme
Location: 31540 - 33237 (+)
Type: CAZyme
Location: 31540 - 33237 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Suilimivivens
Species
Suilimivivens sp000438155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2208_c_19_26 | vegetarian > omnivore | 1.43376 | 0.00588 |