dbCAN HGM

Cluster: Rep_2208_CGC24

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_2208_c_13	Rep_2208_c_13_49	48802	50841	+	GH151
pfam	Rep_2208_c_13	Rep_2208_c_13_50	50881	51831	+	AP_endonuc_2
pfam	Rep_2208_c_13	Rep_2208_c_13_51	51903	53672	+	Fucose_iso_C \| Fucose_iso_N1 \| Fucose_iso_N2
TC	Rep_2208_c_13	Rep_2208_c_13_52	53840	55627	+	8.A.59.2.1
TF	Rep_2208_c_13	Rep_2208_c_13_53	55644	57221	+	HTH_AraC \| HTH_AraC
CAZyme	Rep_2208_c_13	Rep_2208_c_13_54	57336	58517	-	GH109
TF	Rep_2208_c_13	Rep_2208_c_13_55	58699	59517	+	HTH_AraC
TC	Rep_2208_c_13	Rep_2208_c_13_56	59779	61149	+	3.A.1.1.30
TC	Rep_2208_c_13	Rep_2208_c_13_57	61237	62160	+	3.A.1.1.36
TC	Rep_2208_c_13	Rep_2208_c_13_58	62205	63005	+	3.A.1.1.24

Gene ID: Rep_2208_c_13_49
Type: CAZyme
Location: 48802 - 50841 (+)

Gene ID: Rep_2208_c_13_50
Type: pfam
Location: 50881 - 51831 (+)

Gene ID: Rep_2208_c_13_51
Type: pfam
Location: 51903 - 53672 (+)

Gene ID: Rep_2208_c_13_52
Type: TC
Location: 53840 - 55627 (+)

Gene ID: Rep_2208_c_13_53
Type: TF
Location: 55644 - 57221 (+)

Gene ID: Rep_2208_c_13_54
Type: CAZyme
Location: 57336 - 58517 (-)

Gene ID: Rep_2208_c_13_55
Type: TF
Location: 58699 - 59517 (+)

Gene ID: Rep_2208_c_13_56
Type: TC
Location: 59779 - 61149 (+)

Gene ID: Rep_2208_c_13_57
Type: TC
Location: 61237 - 62160 (+)

Gene ID: Rep_2208_c_13_58
Type: TC
Location: 62205 - 63005 (+)

Taxonomic Lineage

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Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_2208_c_13_49	vegetarian > vegan	2.13992	0.00052
Rep_2208_c_13_50	vegetarian > vegan	2.01453	0.00052
Rep_2208_c_13_52	vegetarian > vegan	2.06649	0.00052
Rep_2208_c_13_53	vegetarian > vegan	1.19199	0.00052
Rep_2208_c_13_56	vegetarian > omnivore	1.30292	0.00588
Rep_2208_c_13_56	vegetarian > vegan	1.44393	0.00052
Rep_2208_c_13_58	vegetarian > vegan	1.32699	0.00052