Cluster: Rep_2208_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2208
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2208_c_3 | Rep_2208_c_3_85 | 98362 | 99030 | + | 9.B.31.1.2 |
| pfam | Rep_2208_c_3 | Rep_2208_c_3_86 | 99112 | 100149 | + | NAD_Gly3P_dh_N | ApbA | NAD_binding_2 | F420_oxidored | NAD_Gly3P_dh_C | GPD_NAD_C_bact |
| pfam | Rep_2208_c_3 | Rep_2208_c_3_87 | 100195 | 101418 | + | tRNA-synt_1b | SYY_C-terminal |
| CAZyme | Rep_2208_c_3 | Rep_2208_c_3_88 | 101449 | 103800 | + | GH74 | GH74 | GH74 |
Gene ID: Rep_2208_c_3_85
Type: TC
Location: 98362 - 99030 (+)
Type: TC
Location: 98362 - 99030 (+)
Gene ID: Rep_2208_c_3_86
Type: pfam
Location: 99112 - 100149 (+)
Type: pfam
Location: 99112 - 100149 (+)
Gene ID: Rep_2208_c_3_87
Type: pfam
Location: 100195 - 101418 (+)
Type: pfam
Location: 100195 - 101418 (+)
Gene ID: Rep_2208_c_3_88
Type: CAZyme
Location: 101449 - 103800 (+)
Type: CAZyme
Location: 101449 - 103800 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Suilimivivens
Species
Suilimivivens sp000438155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2208_c_3_86 | vegetarian > vegan | 1.71758 | 0.00052 |