dbCAN HGM

Cluster: Rep_2208_CGC13

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_2208_c_3	Rep_2208_c_3_55	69988	70218	+	3.D.1.6.3
pfam	Rep_2208_c_3	Rep_2208_c_3_56	70307	71002	+	dsrm \| Ribonuclease_3 \| Ribonucleas_3_3
pfam	Rep_2208_c_3	Rep_2208_c_3_57	71020	74580	+	SMC_N \| SMC_hinge \| AAA_15 \| AAA_23
TC	Rep_2208_c_3	Rep_2208_c_3_58	74580	75485	+	3.A.5.1.1
STP	Rep_2208_c_3	Rep_2208_c_3_59	75460	76683	+	ACT \| PALP
TC	Rep_2208_c_3	Rep_2208_c_3_60	76895	77746	+	2.A.115.1.5
CAZyme	Rep_2208_c_3	Rep_2208_c_3_61	77964	79034	+	GH25

Gene ID: Rep_2208_c_3_55
Type: TC
Location: 69988 - 70218 (+)

Gene ID: Rep_2208_c_3_56
Type: pfam
Location: 70307 - 71002 (+)

Gene ID: Rep_2208_c_3_57
Type: pfam
Location: 71020 - 74580 (+)

Gene ID: Rep_2208_c_3_58
Type: TC
Location: 74580 - 75485 (+)

Gene ID: Rep_2208_c_3_59
Type: STP
Location: 75460 - 76683 (+)

Gene ID: Rep_2208_c_3_60
Type: TC
Location: 76895 - 77746 (+)

Gene ID: Rep_2208_c_3_61
Type: CAZyme
Location: 77964 - 79034 (+)

Taxonomic Lineage

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Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_2208_c_3_55	vegetarian > vegan	2.73973	0.00052
Rep_2208_c_3_56	vegetarian > vegan	3.44863	0.00052
Rep_2208_c_3_60	vegetarian > vegan	1.57366	0.00052
Rep_2208_c_3_61	vegetarian > vegan	1.58365	0.00052