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Cluster: Rep_2205_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2205_c_29 Rep_2205_c_29_475 513581 515338 - 3.A.1.106.2
CAZyme Rep_2205_c_29 Rep_2205_c_29_476 515499 518612 - GH38
CAZyme Rep_2205_c_29 Rep_2205_c_29_477 518629 521268 - GH3
CAZyme Rep_2205_c_29 Rep_2205_c_29_478 521284 524034 - GH38
pfam Rep_2205_c_29 Rep_2205_c_29_479 524129 525688 - SBP_bac_1 | DUF3502
TC Rep_2205_c_29 Rep_2205_c_29_480 525751 526635 - 3.A.1.1.29
TC Rep_2205_c_29 Rep_2205_c_29_481 526656 527579 - 3.A.1.1.10
TF Rep_2205_c_29 Rep_2205_c_29_482 527861 528988 + GntR
CAZyme Rep_2205_c_29 Rep_2205_c_29_483 529060 531300 - GH95
TC Rep_2205_c_29 Rep_2205_c_29_484 531313 533091 - 3.A.1.106.2
Gene ID: Rep_2205_c_29_475
Type: TC
Location: 513581 - 515338 (-)
Gene ID: Rep_2205_c_29_476
Type: CAZyme
Location: 515499 - 518612 (-)
Gene ID: Rep_2205_c_29_477
Type: CAZyme
Location: 518629 - 521268 (-)
Gene ID: Rep_2205_c_29_478
Type: CAZyme
Location: 521284 - 524034 (-)
Gene ID: Rep_2205_c_29_479
Type: pfam
Location: 524129 - 525688 (-)
Gene ID: Rep_2205_c_29_480
Type: TC
Location: 525751 - 526635 (-)
Gene ID: Rep_2205_c_29_481
Type: TC
Location: 526656 - 527579 (-)
Gene ID: Rep_2205_c_29_482
Type: TF
Location: 527861 - 528988 (+)
Gene ID: Rep_2205_c_29_483
Type: CAZyme
Location: 529060 - 531300 (-)
Gene ID: Rep_2205_c_29_484
Type: TC
Location: 531313 - 533091 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
UMGS2037
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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