Cluster: Rep_2205_CGC38
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2205
- CGC Family ID: CGCFAM_00710
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2205_c_29 | Rep_2205_c_29_33 | 43793 | 45616 | - | 8.A.59.2.1 |
| STP | Rep_2205_c_29 | Rep_2205_c_29_34 | 45613 | 47235 | - | SBP_bac_1 |
| TC | Rep_2205_c_29 | Rep_2205_c_29_35 | 47399 | 48235 | - | 3.A.1.1.34 |
| TC | Rep_2205_c_29 | Rep_2205_c_29_36 | 48238 | 49191 | - | 3.A.1.1.23 |
| STP | Rep_2205_c_29 | Rep_2205_c_29_37 | 49275 | 50726 | - | SBP_bac_1 |
| CAZyme | Rep_2205_c_29 | Rep_2205_c_29_38 | 50834 | 52153 | - | GH30_1 |
| CAZyme | Rep_2205_c_29 | Rep_2205_c_29_39 | 52176 | 55277 | - | GH161 |
| CAZyme | Rep_2205_c_29 | Rep_2205_c_29_40 | 55299 | 57992 | - | GH94 |
Gene ID: Rep_2205_c_29_33
Type: TC
Location: 43793 - 45616 (-)
Type: TC
Location: 43793 - 45616 (-)
Gene ID: Rep_2205_c_29_34
Type: STP
Location: 45613 - 47235 (-)
Type: STP
Location: 45613 - 47235 (-)
Gene ID: Rep_2205_c_29_35
Type: TC
Location: 47399 - 48235 (-)
Type: TC
Location: 47399 - 48235 (-)
Gene ID: Rep_2205_c_29_36
Type: TC
Location: 48238 - 49191 (-)
Type: TC
Location: 48238 - 49191 (-)
Gene ID: Rep_2205_c_29_37
Type: STP
Location: 49275 - 50726 (-)
Type: STP
Location: 49275 - 50726 (-)
Gene ID: Rep_2205_c_29_38
Type: CAZyme
Location: 50834 - 52153 (-)
Type: CAZyme
Location: 50834 - 52153 (-)
Gene ID: Rep_2205_c_29_39
Type: CAZyme
Location: 52176 - 55277 (-)
Type: CAZyme
Location: 52176 - 55277 (-)
Gene ID: Rep_2205_c_29_40
Type: CAZyme
Location: 55299 - 57992 (-)
Type: CAZyme
Location: 55299 - 57992 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.