Cluster: Rep_2205_CGC35
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_2205
- CGC Family ID: CGCFAM_00005
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2205_c_25 | Rep_2205_c_25_345 | 372765 | 373712 | - | GT2 |
| pfam | Rep_2205_c_25 | Rep_2205_c_25_346 | 374310 | 375305 | - | O-ag_pol_Wzy |
| CAZyme | Rep_2205_c_25 | Rep_2205_c_25_347 | 375302 | 376351 | - | GT2 |
| NULL(UNKNOWN) | Rep_2205_c_25 | Rep_2205_c_25_348 | 376411 | 376518 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2205_c_25 | Rep_2205_c_25_349 | 376457 | 377503 | - | GT4 |
| CAZyme | Rep_2205_c_25 | Rep_2205_c_25_350 | 377516 | 378253 | - | GT2 |
| TC | Rep_2205_c_25 | Rep_2205_c_25_351 | 378246 | 379595 | - | 9.B.18.1.3 |
Gene ID: Rep_2205_c_25_345
Type: CAZyme
Location: 372765 - 373712 (-)
Type: CAZyme
Location: 372765 - 373712 (-)
Gene ID: Rep_2205_c_25_346
Type: pfam
Location: 374310 - 375305 (-)
Type: pfam
Location: 374310 - 375305 (-)
Gene ID: Rep_2205_c_25_347
Type: CAZyme
Location: 375302 - 376351 (-)
Type: CAZyme
Location: 375302 - 376351 (-)
Gene ID: Rep_2205_c_25_348
Type:
Location: 376411 - 376518 (-)
Type:
Location: 376411 - 376518 (-)
Gene ID: Rep_2205_c_25_349
Type: CAZyme
Location: 376457 - 377503 (-)
Type: CAZyme
Location: 376457 - 377503 (-)
Gene ID: Rep_2205_c_25_350
Type: CAZyme
Location: 377516 - 378253 (-)
Type: CAZyme
Location: 377516 - 378253 (-)
Gene ID: Rep_2205_c_25_351
Type: TC
Location: 378246 - 379595 (-)
Type: TC
Location: 378246 - 379595 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.