Cluster: Rep_2205_CGC34
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2205
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2205_c_25 | Rep_2205_c_25_158 | 171584 | 173554 | + | GH13_11 |
| pfam | Rep_2205_c_25 | Rep_2205_c_25_159 | 173557 | 174129 | + | DUF5662 |
| NULL(UNKNOWN) | Rep_2205_c_25 | Rep_2205_c_25_160 | 174157 | 174417 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2205_c_25 | Rep_2205_c_25_161 | 174475 | 175539 | - | 3.A.1.11.7 |
| TC | Rep_2205_c_25 | Rep_2205_c_25_162 | 175560 | 176360 | - | 3.A.1.11.1 |
| TC | Rep_2205_c_25 | Rep_2205_c_25_163 | 176357 | 177181 | - | 3.A.1.11.8 |
| TC | Rep_2205_c_25 | Rep_2205_c_25_164 | 177174 | 178247 | - | 3.A.1.11.8 |
Gene ID: Rep_2205_c_25_158
Type: CAZyme
Location: 171584 - 173554 (+)
Type: CAZyme
Location: 171584 - 173554 (+)
Gene ID: Rep_2205_c_25_159
Type: pfam
Location: 173557 - 174129 (+)
Type: pfam
Location: 173557 - 174129 (+)
Gene ID: Rep_2205_c_25_160
Type:
Location: 174157 - 174417 (+)
Type:
Location: 174157 - 174417 (+)
Gene ID: Rep_2205_c_25_161
Type: TC
Location: 174475 - 175539 (-)
Type: TC
Location: 174475 - 175539 (-)
Gene ID: Rep_2205_c_25_162
Type: TC
Location: 175560 - 176360 (-)
Type: TC
Location: 175560 - 176360 (-)
Gene ID: Rep_2205_c_25_163
Type: TC
Location: 176357 - 177181 (-)
Type: TC
Location: 176357 - 177181 (-)
Gene ID: Rep_2205_c_25_164
Type: TC
Location: 177174 - 178247 (-)
Type: TC
Location: 177174 - 178247 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.