Cluster: Rep_2205_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2205
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2205_c_0 | Rep_2205_c_0_85 | 94474 | 95382 | - | 3.A.1.1.9 |
| TC | Rep_2205_c_0 | Rep_2205_c_0_86 | 95406 | 96332 | - | 3.A.1.1.29 |
| STP | Rep_2205_c_0 | Rep_2205_c_0_87 | 96521 | 97804 | - | SBP_bac_1 |
| TC | Rep_2205_c_0 | Rep_2205_c_0_88 | 97791 | 99557 | - | 9.B.33.1.1 |
| TF | Rep_2205_c_0 | Rep_2205_c_0_89 | 99526 | 100287 | - | HTH_AraC | HTH_AraC |
| pfam | Rep_2205_c_0 | Rep_2205_c_0_90 | 100388 | 101806 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | Rep_2205_c_0 | Rep_2205_c_0_91 | 101837 | 104239 | - | GH94 |
Gene ID: Rep_2205_c_0_85
Type: TC
Location: 94474 - 95382 (-)
Type: TC
Location: 94474 - 95382 (-)
Gene ID: Rep_2205_c_0_86
Type: TC
Location: 95406 - 96332 (-)
Type: TC
Location: 95406 - 96332 (-)
Gene ID: Rep_2205_c_0_87
Type: STP
Location: 96521 - 97804 (-)
Type: STP
Location: 96521 - 97804 (-)
Gene ID: Rep_2205_c_0_88
Type: TC
Location: 97791 - 99557 (-)
Type: TC
Location: 97791 - 99557 (-)
Gene ID: Rep_2205_c_0_89
Type: TF
Location: 99526 - 100287 (-)
Type: TF
Location: 99526 - 100287 (-)
Gene ID: Rep_2205_c_0_90
Type: pfam
Location: 100388 - 101806 (-)
Type: pfam
Location: 100388 - 101806 (-)
Gene ID: Rep_2205_c_0_91
Type: CAZyme
Location: 101837 - 104239 (-)
Type: CAZyme
Location: 101837 - 104239 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.