Cluster: Rep_2205_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2205
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2205_c_22 | Rep_2205_c_22_134 | 148342 | 149541 | + | GH25 |
| TC | Rep_2205_c_22 | Rep_2205_c_22_135 | 149574 | 150140 | - | 3.A.1.26.9 |
| STP | Rep_2205_c_22 | Rep_2205_c_22_136 | 150530 | 150742 | + | FeoA |
| STP | Rep_2205_c_22 | Rep_2205_c_22_137 | 150805 | 151023 | + | FeoA |
| TC | Rep_2205_c_22 | Rep_2205_c_22_138 | 151090 | 153222 | + | 9.A.8.1.9 |
Gene ID: Rep_2205_c_22_134
Type: CAZyme
Location: 148342 - 149541 (+)
Type: CAZyme
Location: 148342 - 149541 (+)
Gene ID: Rep_2205_c_22_135
Type: TC
Location: 149574 - 150140 (-)
Type: TC
Location: 149574 - 150140 (-)
Gene ID: Rep_2205_c_22_136
Type: STP
Location: 150530 - 150742 (+)
Type: STP
Location: 150530 - 150742 (+)
Gene ID: Rep_2205_c_22_137
Type: STP
Location: 150805 - 151023 (+)
Type: STP
Location: 150805 - 151023 (+)
Gene ID: Rep_2205_c_22_138
Type: TC
Location: 151090 - 153222 (+)
Type: TC
Location: 151090 - 153222 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2205_c_22_137 | vegan > omnivore | 2.67771 | 0.00863 |