Cluster: Rep_2205_CGC17
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 7
- Substrate:
- Genome ID: Rep_2205
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2205_c_3 | Rep_2205_c_3_56 | 62897 | 63862 | - | GT2 |
| STP | Rep_2205_c_3 | Rep_2205_c_3_57 | 63874 | 65067 | - | Aminotran_1_2 |
| TC | Rep_2205_c_3 | Rep_2205_c_3_58 | 65304 | 66308 | - | 9.B.18.2.1 |
| pfam | Rep_2205_c_3 | Rep_2205_c_3_59 | 66347 | 67936 | - | DUF5722 |
| CAZyme | Rep_2205_c_3 | Rep_2205_c_3_60 | 68071 | 69102 | - | GT2 |
| TC | Rep_2205_c_3 | Rep_2205_c_3_61 | 69103 | 70842 | - | 3.A.1.106.15 |
| CAZyme | Rep_2205_c_3 | Rep_2205_c_3_62 | 70861 | 71943 | - | GT100 |
| CAZyme | Rep_2205_c_3 | Rep_2205_c_3_63 | 71940 | 72965 | - | GT2 |
| CAZyme | Rep_2205_c_3 | Rep_2205_c_3_64 | 72955 | 74169 | - | GT4 |
| CAZyme | Rep_2205_c_3 | Rep_2205_c_3_65 | 74166 | 75479 | - | GT4 |
| CAZyme | Rep_2205_c_3 | Rep_2205_c_3_66 | 75500 | 76309 | - | GT2 |
Gene ID: Rep_2205_c_3_56
Type: CAZyme
Location: 62897 - 63862 (-)
Type: CAZyme
Location: 62897 - 63862 (-)
Gene ID: Rep_2205_c_3_57
Type: STP
Location: 63874 - 65067 (-)
Type: STP
Location: 63874 - 65067 (-)
Gene ID: Rep_2205_c_3_58
Type: TC
Location: 65304 - 66308 (-)
Type: TC
Location: 65304 - 66308 (-)
Gene ID: Rep_2205_c_3_59
Type: pfam
Location: 66347 - 67936 (-)
Type: pfam
Location: 66347 - 67936 (-)
Gene ID: Rep_2205_c_3_60
Type: CAZyme
Location: 68071 - 69102 (-)
Type: CAZyme
Location: 68071 - 69102 (-)
Gene ID: Rep_2205_c_3_61
Type: TC
Location: 69103 - 70842 (-)
Type: TC
Location: 69103 - 70842 (-)
Gene ID: Rep_2205_c_3_62
Type: CAZyme
Location: 70861 - 71943 (-)
Type: CAZyme
Location: 70861 - 71943 (-)
Gene ID: Rep_2205_c_3_63
Type: CAZyme
Location: 71940 - 72965 (-)
Type: CAZyme
Location: 71940 - 72965 (-)
Gene ID: Rep_2205_c_3_64
Type: CAZyme
Location: 72955 - 74169 (-)
Type: CAZyme
Location: 72955 - 74169 (-)
Gene ID: Rep_2205_c_3_65
Type: CAZyme
Location: 74166 - 75479 (-)
Type: CAZyme
Location: 74166 - 75479 (-)
Gene ID: Rep_2205_c_3_66
Type: CAZyme
Location: 75500 - 76309 (-)
Type: CAZyme
Location: 75500 - 76309 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.