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Cluster: Rep_2205_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2205_c_3 Rep_2205_c_3_39 41040 42152 - GT4
pfam Rep_2205_c_3 Rep_2205_c_3_40 42149 43204 - FemAB | FemAB | FemAB_like | Acetyltransf_6
NULL(UNKNOWN) Rep_2205_c_3 Rep_2205_c_3_41 43191 45212 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2205_c_3 Rep_2205_c_3_42 45178 45825 - 9.B.18.1.2
pfam Rep_2205_c_3 Rep_2205_c_3_43 45854 47137 - DegT_DnrJ_EryC1 | Beta_elim_lyase
TC Rep_2205_c_3 Rep_2205_c_3_44 47130 49010 - 9.B.18.2.1
NULL(UNKNOWN) Rep_2205_c_3 Rep_2205_c_3_45 49014 51476 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2205_c_3 Rep_2205_c_3_46 51442 52845 - GT83
CAZyme Rep_2205_c_3 Rep_2205_c_3_47 52846 53781 - GT2
Gene ID: Rep_2205_c_3_39
Type: CAZyme
Location: 41040 - 42152 (-)
Gene ID: Rep_2205_c_3_40
Type: pfam
Location: 42149 - 43204 (-)
Gene ID: Rep_2205_c_3_41
Type:
Location: 43191 - 45212 (-)
Gene ID: Rep_2205_c_3_42
Type: TC
Location: 45178 - 45825 (-)
Gene ID: Rep_2205_c_3_43
Type: pfam
Location: 45854 - 47137 (-)
Gene ID: Rep_2205_c_3_44
Type: TC
Location: 47130 - 49010 (-)
Gene ID: Rep_2205_c_3_45
Type:
Location: 49014 - 51476 (-)
Gene ID: Rep_2205_c_3_46
Type: CAZyme
Location: 51442 - 52845 (-)
Gene ID: Rep_2205_c_3_47
Type: CAZyme
Location: 52846 - 53781 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
UMGS2037
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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