Cluster: Rep_2205_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2205
- CGC Family ID: CGCFAM_02303
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2205_c_2 | Rep_2205_c_2_26 | 20635 | 22557 | - | GH2 |
| TC | Rep_2205_c_2 | Rep_2205_c_2_27 | 22573 | 23406 | - | 3.A.1.1.18 |
| TC | Rep_2205_c_2 | Rep_2205_c_2_28 | 23399 | 24310 | - | 3.A.1.1.4 |
| STP | Rep_2205_c_2 | Rep_2205_c_2_29 | 24368 | 25927 | - | SBP_bac_1 |
| TF | Rep_2205_c_2 | Rep_2205_c_2_30 | 26042 | 28288 | - | HTH_AraC | HTH_AraC |
| CAZyme | Rep_2205_c_2 | Rep_2205_c_2_31 | 28512 | 30059 | - | GH13_44 |
Gene ID: Rep_2205_c_2_26
Type: CAZyme
Location: 20635 - 22557 (-)
Type: CAZyme
Location: 20635 - 22557 (-)
Gene ID: Rep_2205_c_2_27
Type: TC
Location: 22573 - 23406 (-)
Type: TC
Location: 22573 - 23406 (-)
Gene ID: Rep_2205_c_2_28
Type: TC
Location: 23399 - 24310 (-)
Type: TC
Location: 23399 - 24310 (-)
Gene ID: Rep_2205_c_2_29
Type: STP
Location: 24368 - 25927 (-)
Type: STP
Location: 24368 - 25927 (-)
Gene ID: Rep_2205_c_2_30
Type: TF
Location: 26042 - 28288 (-)
Type: TF
Location: 26042 - 28288 (-)
Gene ID: Rep_2205_c_2_31
Type: CAZyme
Location: 28512 - 30059 (-)
Type: CAZyme
Location: 28512 - 30059 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.