Cluster: Rep_2205_CGC11
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2205
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2205_c_1 | Rep_2205_c_1_154 | 203769 | 204398 | + | 9.A.11.1.1 |
| pfam | Rep_2205_c_1 | Rep_2205_c_1_155 | 204385 | 204873 | + | SpoVAB |
| TC | Rep_2205_c_1 | Rep_2205_c_1_156 | 204893 | 205381 | + | 9.A.11.1.1 |
| STP | Rep_2205_c_1 | Rep_2205_c_1_157 | 205494 | 206276 | + | MCPsignal |
| peptidase | Rep_2205_c_1 | Rep_2205_c_1_158 | 206352 | 207191 | + | M15.021 |
| CAZyme | Rep_2205_c_1 | Rep_2205_c_1_159 | 207207 | 209153 | + | GH3 |
| TC | Rep_2205_c_1 | Rep_2205_c_1_160 | 209187 | 211025 | + | 3.A.16.1.2 |
| peptidase | Rep_2205_c_1 | Rep_2205_c_1_161 | 211029 | 212009 | - | C59.951 |
| pfam | Rep_2205_c_1 | Rep_2205_c_1_162 | 212117 | 213721 | - | PEPCK_ATP |
| TC | Rep_2205_c_1 | Rep_2205_c_1_163 | 213966 | 215567 | + | 2.A.1.15.16 |
| STP | Rep_2205_c_1 | Rep_2205_c_1_164 | 215570 | 216403 | - | Hemerythrin | Hemerythrin |
| TC | Rep_2205_c_1 | Rep_2205_c_1_165 | 216504 | 216968 | - | 9.A.24.1.7 |
| NULL(UNKNOWN) | Rep_2205_c_1 | Rep_2205_c_1_166 | 217102 | 217599 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2205_c_1 | Rep_2205_c_1_167 | 217627 | 218418 | - | 9.B.115.1.1 |
Gene ID: Rep_2205_c_1_154
Type: TC
Location: 203769 - 204398 (+)
Type: TC
Location: 203769 - 204398 (+)
Gene ID: Rep_2205_c_1_155
Type: pfam
Location: 204385 - 204873 (+)
Type: pfam
Location: 204385 - 204873 (+)
Gene ID: Rep_2205_c_1_156
Type: TC
Location: 204893 - 205381 (+)
Type: TC
Location: 204893 - 205381 (+)
Gene ID: Rep_2205_c_1_157
Type: STP
Location: 205494 - 206276 (+)
Type: STP
Location: 205494 - 206276 (+)
Gene ID: Rep_2205_c_1_158
Type: peptidase
Location: 206352 - 207191 (+)
Type: peptidase
Location: 206352 - 207191 (+)
Gene ID: Rep_2205_c_1_159
Type: CAZyme
Location: 207207 - 209153 (+)
Type: CAZyme
Location: 207207 - 209153 (+)
Gene ID: Rep_2205_c_1_160
Type: TC
Location: 209187 - 211025 (+)
Type: TC
Location: 209187 - 211025 (+)
Gene ID: Rep_2205_c_1_161
Type: peptidase
Location: 211029 - 212009 (-)
Type: peptidase
Location: 211029 - 212009 (-)
Gene ID: Rep_2205_c_1_162
Type: pfam
Location: 212117 - 213721 (-)
Type: pfam
Location: 212117 - 213721 (-)
Gene ID: Rep_2205_c_1_163
Type: TC
Location: 213966 - 215567 (+)
Type: TC
Location: 213966 - 215567 (+)
Gene ID: Rep_2205_c_1_164
Type: STP
Location: 215570 - 216403 (-)
Type: STP
Location: 215570 - 216403 (-)
Gene ID: Rep_2205_c_1_165
Type: TC
Location: 216504 - 216968 (-)
Type: TC
Location: 216504 - 216968 (-)
Gene ID: Rep_2205_c_1_166
Type:
Location: 217102 - 217599 (-)
Type:
Location: 217102 - 217599 (-)
Gene ID: Rep_2205_c_1_167
Type: TC
Location: 217627 - 218418 (-)
Type: TC
Location: 217627 - 218418 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.