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Cluster: Rep_2197_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2197_c_18 Rep_2197_c_18_164 177916 178872 + GT2
pfam Rep_2197_c_18 Rep_2197_c_18_165 178876 179631 + Polysacc_deac_1 | DUF2334
CAZyme Rep_2197_c_18 Rep_2197_c_18_166 179702 181993 + GT4 | GT4
NULL(UNKNOWN) Rep_2197_c_18 Rep_2197_c_18_167 182001 183251 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_2197_c_18 Rep_2197_c_18_168 183320 184084 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2197_c_18 Rep_2197_c_18_169 184134 185231 + GT4
pfam Rep_2197_c_18 Rep_2197_c_18_170 185290 186261 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | GDP_Man_Dehyd
CAZyme Rep_2197_c_18 Rep_2197_c_18_171 186258 187328 + GT2
CAZyme Rep_2197_c_18 Rep_2197_c_18_172 187330 188214 + GT11
TC Rep_2197_c_18 Rep_2197_c_18_173 188211 189959 + 3.A.1.106.15
CAZyme Rep_2197_c_18 Rep_2197_c_18_174 189981 191015 + GT11
NULL(UNKNOWN) Rep_2197_c_18 Rep_2197_c_18_175 191030 193369 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_2197_c_18 Rep_2197_c_18_176 193354 194064 + DUF5672
CAZyme Rep_2197_c_18 Rep_2197_c_18_177 194116 195081 + GT17
CAZyme Rep_2197_c_18 Rep_2197_c_18_178 195158 196057 + GT2
pfam Rep_2197_c_18 Rep_2197_c_18_179 196036 197607 + Glucos_trans_II
NULL(UNKNOWN) Rep_2197_c_18 Rep_2197_c_18_180 197650 198807 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2197_c_18 Rep_2197_c_18_181 198826 200247 + 9.B.18.1.2
CAZyme Rep_2197_c_18 Rep_2197_c_18_182 200302 201429 + GT4
CAZyme Rep_2197_c_18 Rep_2197_c_18_183 201407 202621 + GT4
Gene ID: Rep_2197_c_18_164
Type: CAZyme
Location: 177916 - 178872 (+)
Gene ID: Rep_2197_c_18_165
Type: pfam
Location: 178876 - 179631 (+)
Gene ID: Rep_2197_c_18_166
Type: CAZyme
Location: 179702 - 181993 (+)
Gene ID: Rep_2197_c_18_167
Type:
Location: 182001 - 183251 (+)
Gene ID: Rep_2197_c_18_168
Type:
Location: 183320 - 184084 (+)
Gene ID: Rep_2197_c_18_169
Type: CAZyme
Location: 184134 - 185231 (+)
Gene ID: Rep_2197_c_18_170
Type: pfam
Location: 185290 - 186261 (+)
Gene ID: Rep_2197_c_18_171
Type: CAZyme
Location: 186258 - 187328 (+)
Gene ID: Rep_2197_c_18_172
Type: CAZyme
Location: 187330 - 188214 (+)
Gene ID: Rep_2197_c_18_173
Type: TC
Location: 188211 - 189959 (+)
Gene ID: Rep_2197_c_18_174
Type: CAZyme
Location: 189981 - 191015 (+)
Gene ID: Rep_2197_c_18_175
Type:
Location: 191030 - 193369 (+)
Gene ID: Rep_2197_c_18_176
Type: pfam
Location: 193354 - 194064 (+)
Gene ID: Rep_2197_c_18_177
Type: CAZyme
Location: 194116 - 195081 (+)
Gene ID: Rep_2197_c_18_178
Type: CAZyme
Location: 195158 - 196057 (+)
Gene ID: Rep_2197_c_18_179
Type: pfam
Location: 196036 - 197607 (+)
Gene ID: Rep_2197_c_18_180
Type:
Location: 197650 - 198807 (+)
Gene ID: Rep_2197_c_18_181
Type: TC
Location: 198826 - 200247 (+)
Gene ID: Rep_2197_c_18_182
Type: CAZyme
Location: 200302 - 201429 (+)
Gene ID: Rep_2197_c_18_183
Type: CAZyme
Location: 201407 - 202621 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
CAG-510
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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