Cluster: Rep_2197_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2197
- CGC Family ID: CGCFAM_00171
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2197_c_18 | Rep_2197_c_18_155 | 167717 | 169567 | + | 9.B.18.2.1 |
| STP | Rep_2197_c_18 | Rep_2197_c_18_156 | 169593 | 170717 | + | Aminotran_1_2 |
| TC | Rep_2197_c_18 | Rep_2197_c_18_157 | 170794 | 171441 | + | 9.B.18.1.2 |
| STP | Rep_2197_c_18 | Rep_2197_c_18_158 | 171419 | 172372 | + | PALP |
| pfam | Rep_2197_c_18 | Rep_2197_c_18_159 | 172402 | 173385 | + | ATP-grasp_3 | Dala_Dala_lig_C | ATPgrasp_Ter | PylC-like_N |
| CAZyme | Rep_2197_c_18 | Rep_2197_c_18_160 | 173386 | 174474 | + | GT4 |
Gene ID: Rep_2197_c_18_155
Type: TC
Location: 167717 - 169567 (+)
Type: TC
Location: 167717 - 169567 (+)
Gene ID: Rep_2197_c_18_156
Type: STP
Location: 169593 - 170717 (+)
Type: STP
Location: 169593 - 170717 (+)
Gene ID: Rep_2197_c_18_157
Type: TC
Location: 170794 - 171441 (+)
Type: TC
Location: 170794 - 171441 (+)
Gene ID: Rep_2197_c_18_158
Type: STP
Location: 171419 - 172372 (+)
Type: STP
Location: 171419 - 172372 (+)
Gene ID: Rep_2197_c_18_159
Type: pfam
Location: 172402 - 173385 (+)
Type: pfam
Location: 172402 - 173385 (+)
Gene ID: Rep_2197_c_18_160
Type: CAZyme
Location: 173386 - 174474 (+)
Type: CAZyme
Location: 173386 - 174474 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-510
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.