Cluster: Rep_2197_CGC43
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2197
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2197_c_85 | Rep_2197_c_85_46 | 44615 | 46876 | + | GH3 |
| TC | Rep_2197_c_85 | Rep_2197_c_85_47 | 47030 | 49186 | + | 3.A.1.135.6 |
| TC | Rep_2197_c_85 | Rep_2197_c_85_48 | 49183 | 51042 | + | 3.A.1.135.6 |
| TC | Rep_2197_c_85 | Rep_2197_c_85_49 | 51140 | 52405 | + | 8.A.59.4.1 |
| NULL(UNKNOWN) | Rep_2197_c_85 | Rep_2197_c_85_50 | 52436 | 52963 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2197_c_85 | Rep_2197_c_85_51 | 52960 | 53841 | - | Cons_hypoth95 | Methyltrans_SAM |
| TC | Rep_2197_c_85 | Rep_2197_c_85_52 | 54016 | 55533 | + | 2.A.50.2.1 |
Gene ID: Rep_2197_c_85_46
Type: CAZyme
Location: 44615 - 46876 (+)
Type: CAZyme
Location: 44615 - 46876 (+)
Gene ID: Rep_2197_c_85_47
Type: TC
Location: 47030 - 49186 (+)
Type: TC
Location: 47030 - 49186 (+)
Gene ID: Rep_2197_c_85_48
Type: TC
Location: 49183 - 51042 (+)
Type: TC
Location: 49183 - 51042 (+)
Gene ID: Rep_2197_c_85_49
Type: TC
Location: 51140 - 52405 (+)
Type: TC
Location: 51140 - 52405 (+)
Gene ID: Rep_2197_c_85_50
Type:
Location: 52436 - 52963 (-)
Type:
Location: 52436 - 52963 (-)
Gene ID: Rep_2197_c_85_51
Type: pfam
Location: 52960 - 53841 (-)
Type: pfam
Location: 52960 - 53841 (-)
Gene ID: Rep_2197_c_85_52
Type: TC
Location: 54016 - 55533 (+)
Type: TC
Location: 54016 - 55533 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-510
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2197_c_85_51 | vegetarian > vegan | 1.23006 | 0.00863 |