Cluster: Rep_2197_CGC40
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2197
- CGC Family ID: CGCFAM_00199
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2197_c_81 | Rep_2197_c_81_84 | 81785 | 83083 | + | 3.A.1.1.28 |
| TC | Rep_2197_c_81 | Rep_2197_c_81_85 | 83080 | 83955 | + | 3.A.1.1.45 |
| TC | Rep_2197_c_81 | Rep_2197_c_81_86 | 83952 | 84794 | + | 3.A.1.1.45 |
| CAZyme | Rep_2197_c_81 | Rep_2197_c_81_87 | 84802 | 87003 | + | GH36 |
| CAZyme | Rep_2197_c_81 | Rep_2197_c_81_88 | 87054 | 88922 | + | GH13_4 |
Gene ID: Rep_2197_c_81_84
Type: TC
Location: 81785 - 83083 (+)
Type: TC
Location: 81785 - 83083 (+)
Gene ID: Rep_2197_c_81_85
Type: TC
Location: 83080 - 83955 (+)
Type: TC
Location: 83080 - 83955 (+)
Gene ID: Rep_2197_c_81_86
Type: TC
Location: 83952 - 84794 (+)
Type: TC
Location: 83952 - 84794 (+)
Gene ID: Rep_2197_c_81_87
Type: CAZyme
Location: 84802 - 87003 (+)
Type: CAZyme
Location: 84802 - 87003 (+)
Gene ID: Rep_2197_c_81_88
Type: CAZyme
Location: 87054 - 88922 (+)
Type: CAZyme
Location: 87054 - 88922 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-510
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.