Cluster: Rep_2197_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2197
- CGC Family ID: CGCFAM_00114
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2197_c_71 | Rep_2197_c_71_24 | 23833 | 24606 | + | 3.A.1.17.8 |
| TC | Rep_2197_c_71 | Rep_2197_c_71_25 | 24593 | 25411 | + | 3.A.1.17.1 |
| pfam | Rep_2197_c_71 | Rep_2197_c_71_26 | 25471 | 27744 | - | Zn_Ribbon_1 |
| TC | Rep_2197_c_71 | Rep_2197_c_71_27 | 28008 | 28820 | - | 1.A.23.2.1 |
| CAZyme | Rep_2197_c_71 | Rep_2197_c_71_28 | 28847 | 31114 | - | CBM48 | GH13_9 |
Gene ID: Rep_2197_c_71_24
Type: TC
Location: 23833 - 24606 (+)
Type: TC
Location: 23833 - 24606 (+)
Gene ID: Rep_2197_c_71_25
Type: TC
Location: 24593 - 25411 (+)
Type: TC
Location: 24593 - 25411 (+)
Gene ID: Rep_2197_c_71_26
Type: pfam
Location: 25471 - 27744 (-)
Type: pfam
Location: 25471 - 27744 (-)
Gene ID: Rep_2197_c_71_27
Type: TC
Location: 28008 - 28820 (-)
Type: TC
Location: 28008 - 28820 (-)
Gene ID: Rep_2197_c_71_28
Type: CAZyme
Location: 28847 - 31114 (-)
Type: CAZyme
Location: 28847 - 31114 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-510
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.