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Cluster: Rep_2197_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2197_c_68 Rep_2197_c_68_17 20239 22185 - GH133
CAZyme Rep_2197_c_68 Rep_2197_c_68_18 22218 23705 - GH77
CAZyme Rep_2197_c_68 Rep_2197_c_68_19 23722 25647 - GH13_14
TC Rep_2197_c_68 Rep_2197_c_68_20 25752 26603 - 3.A.1.1.27
TC Rep_2197_c_68 Rep_2197_c_68_21 26603 27997 - 3.A.1.1.27
TC Rep_2197_c_68 Rep_2197_c_68_22 28020 29336 - 3.A.1.1.27
TF Rep_2197_c_68 Rep_2197_c_68_23 29756 30754 + LacI
CAZyme Rep_2197_c_68 Rep_2197_c_68_24 30755 32746 - GH31_4
Gene ID: Rep_2197_c_68_17
Type: CAZyme
Location: 20239 - 22185 (-)
Gene ID: Rep_2197_c_68_18
Type: CAZyme
Location: 22218 - 23705 (-)
Gene ID: Rep_2197_c_68_19
Type: CAZyme
Location: 23722 - 25647 (-)
Gene ID: Rep_2197_c_68_20
Type: TC
Location: 25752 - 26603 (-)
Gene ID: Rep_2197_c_68_21
Type: TC
Location: 26603 - 27997 (-)
Gene ID: Rep_2197_c_68_22
Type: TC
Location: 28020 - 29336 (-)
Gene ID: Rep_2197_c_68_23
Type: TF
Location: 29756 - 30754 (+)
Gene ID: Rep_2197_c_68_24
Type: CAZyme
Location: 30755 - 32746 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
CAG-510
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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