Cluster: Rep_2197_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2197
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2197_c_60 | Rep_2197_c_60_49 | 54443 | 56257 | + | 3.A.16.1.2 |
| CAZyme | Rep_2197_c_60 | Rep_2197_c_60_50 | 56544 | 58643 | + | GH13_39 |
| pfam | Rep_2197_c_60 | Rep_2197_c_60_51 | 58671 | 59684 | + | Aldose_epim |
| CAZyme | Rep_2197_c_60 | Rep_2197_c_60_52 | 59706 | 60854 | + | GT100 |
| TC | Rep_2197_c_60 | Rep_2197_c_60_53 | 60839 | 62578 | + | 3.A.1.106.15 |
| pfam | Rep_2197_c_60 | Rep_2197_c_60_54 | 62662 | 63483 | + | Phage_integrase |
| CAZyme | Rep_2197_c_60 | Rep_2197_c_60_55 | 63815 | 64915 | + | GH24 |
Gene ID: Rep_2197_c_60_49
Type: TC
Location: 54443 - 56257 (+)
Type: TC
Location: 54443 - 56257 (+)
Gene ID: Rep_2197_c_60_50
Type: CAZyme
Location: 56544 - 58643 (+)
Type: CAZyme
Location: 56544 - 58643 (+)
Gene ID: Rep_2197_c_60_51
Type: pfam
Location: 58671 - 59684 (+)
Type: pfam
Location: 58671 - 59684 (+)
Gene ID: Rep_2197_c_60_52
Type: CAZyme
Location: 59706 - 60854 (+)
Type: CAZyme
Location: 59706 - 60854 (+)
Gene ID: Rep_2197_c_60_53
Type: TC
Location: 60839 - 62578 (+)
Type: TC
Location: 60839 - 62578 (+)
Gene ID: Rep_2197_c_60_54
Type: pfam
Location: 62662 - 63483 (+)
Type: pfam
Location: 62662 - 63483 (+)
Gene ID: Rep_2197_c_60_55
Type: CAZyme
Location: 63815 - 64915 (+)
Type: CAZyme
Location: 63815 - 64915 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-510
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.