Cluster: Rep_2197_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2197
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2197_c_59 | Rep_2197_c_59_51 | 56378 | 59917 | - | GH2 |
| pfam | Rep_2197_c_59 | Rep_2197_c_59_52 | 60081 | 60605 | - | PAP2 |
| TC | Rep_2197_c_59 | Rep_2197_c_59_53 | 60627 | 62069 | - | 2.A.40.7.2 |
| pfam | Rep_2197_c_59 | Rep_2197_c_59_54 | 62217 | 62876 | - | Ribul_P_3_epim |
| pfam | Rep_2197_c_59 | Rep_2197_c_59_55 | 62873 | 63520 | - | DUF308 | DUF308 | DUF308 |
| CAZyme | Rep_2197_c_59 | Rep_2197_c_59_56 | 63616 | 64776 | - | GH5_4 |
Gene ID: Rep_2197_c_59_51
Type: CAZyme
Location: 56378 - 59917 (-)
Type: CAZyme
Location: 56378 - 59917 (-)
Gene ID: Rep_2197_c_59_52
Type: pfam
Location: 60081 - 60605 (-)
Type: pfam
Location: 60081 - 60605 (-)
Gene ID: Rep_2197_c_59_53
Type: TC
Location: 60627 - 62069 (-)
Type: TC
Location: 60627 - 62069 (-)
Gene ID: Rep_2197_c_59_54
Type: pfam
Location: 62217 - 62876 (-)
Type: pfam
Location: 62217 - 62876 (-)
Gene ID: Rep_2197_c_59_55
Type: pfam
Location: 62873 - 63520 (-)
Type: pfam
Location: 62873 - 63520 (-)
Gene ID: Rep_2197_c_59_56
Type: CAZyme
Location: 63616 - 64776 (-)
Type: CAZyme
Location: 63616 - 64776 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-510
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.