Cluster: Rep_2197_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2197
- CGC Family ID: CGCFAM_00327
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2197_c_56 | Rep_2197_c_56_3 | 1683 | 4340 | - | GT51 |
| pfam | Rep_2197_c_56 | Rep_2197_c_56_4 | 4531 | 5178 | + | UPF0029 | DUF1949 |
| TC | Rep_2197_c_56 | Rep_2197_c_56_5 | 5333 | 6664 | + | 1.A.26.1.2 |
| pfam | Rep_2197_c_56 | Rep_2197_c_56_6 | 6723 | 7145 | + | Acetyltransf_1 | FR47 | Acetyltransf_7 | Acetyltransf_10 |
| TC | Rep_2197_c_56 | Rep_2197_c_56_7 | 7179 | 8975 | - | 3.A.1.106.3 |
| TC | Rep_2197_c_56 | Rep_2197_c_56_8 | 8993 | 10729 | - | 3.A.1.106.3 |
Gene ID: Rep_2197_c_56_3
Type: CAZyme
Location: 1683 - 4340 (-)
Type: CAZyme
Location: 1683 - 4340 (-)
Gene ID: Rep_2197_c_56_4
Type: pfam
Location: 4531 - 5178 (+)
Type: pfam
Location: 4531 - 5178 (+)
Gene ID: Rep_2197_c_56_5
Type: TC
Location: 5333 - 6664 (+)
Type: TC
Location: 5333 - 6664 (+)
Gene ID: Rep_2197_c_56_6
Type: pfam
Location: 6723 - 7145 (+)
Type: pfam
Location: 6723 - 7145 (+)
Gene ID: Rep_2197_c_56_7
Type: TC
Location: 7179 - 8975 (-)
Type: TC
Location: 7179 - 8975 (-)
Gene ID: Rep_2197_c_56_8
Type: TC
Location: 8993 - 10729 (-)
Type: TC
Location: 8993 - 10729 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-510
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.