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Cluster: Rep_2197_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2197_c_54 Rep_2197_c_54_21 20701 23217 + GH2
TC Rep_2197_c_54 Rep_2197_c_54_22 23225 24592 - 2.A.66.1.33
CAZyme Rep_2197_c_54 Rep_2197_c_54_23 24681 25724 + GH5_8
CAZyme Rep_2197_c_54 Rep_2197_c_54_24 25755 27065 + CE17
CAZyme Rep_2197_c_54 Rep_2197_c_54_25 27133 28059 - GH26
CAZyme Rep_2197_c_54 Rep_2197_c_54_26 28511 30046 + CBM35 | GH26
STP Rep_2197_c_54 Rep_2197_c_54_27 30099 33101 + SBP_bac_1
TC Rep_2197_c_54 Rep_2197_c_54_28 33114 34073 + 3.A.1.1.11
TC Rep_2197_c_54 Rep_2197_c_54_29 34073 34975 + 3.A.1.1.39
Gene ID: Rep_2197_c_54_21
Type: CAZyme
Location: 20701 - 23217 (+)
Gene ID: Rep_2197_c_54_22
Type: TC
Location: 23225 - 24592 (-)
Gene ID: Rep_2197_c_54_23
Type: CAZyme
Location: 24681 - 25724 (+)
Gene ID: Rep_2197_c_54_24
Type: CAZyme
Location: 25755 - 27065 (+)
Gene ID: Rep_2197_c_54_25
Type: CAZyme
Location: 27133 - 28059 (-)
Gene ID: Rep_2197_c_54_26
Type: CAZyme
Location: 28511 - 30046 (+)
Gene ID: Rep_2197_c_54_27
Type: STP
Location: 30099 - 33101 (+)
Gene ID: Rep_2197_c_54_28
Type: TC
Location: 33114 - 34073 (+)
Gene ID: Rep_2197_c_54_29
Type: TC
Location: 34073 - 34975 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
CAG-510
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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