Cluster: Rep_2197_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2197
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2197_c_48 | Rep_2197_c_48_189 | 197346 | 198332 | - | CE4 |
| pfam | Rep_2197_c_48 | Rep_2197_c_48_190 | 198408 | 199334 | - | SUFBD_core |
| TC | Rep_2197_c_48 | Rep_2197_c_48_191 | 199352 | 200074 | - | 3.A.1.12.14 |
| TF | Rep_2197_c_48 | Rep_2197_c_48_192 | 200250 | 200615 | + | Fe_dep_repress |
| STP | Rep_2197_c_48 | Rep_2197_c_48_193 | 200603 | 201277 | - | TetR_N |
| TC | Rep_2197_c_48 | Rep_2197_c_48_194 | 201279 | 205181 | - | 2.A.6.3.6 |
| TC | Rep_2197_c_48 | Rep_2197_c_48_195 | 205355 | 206533 | - | 2.A.37.2.2 |
Gene ID: Rep_2197_c_48_189
Type: CAZyme
Location: 197346 - 198332 (-)
Type: CAZyme
Location: 197346 - 198332 (-)
Gene ID: Rep_2197_c_48_190
Type: pfam
Location: 198408 - 199334 (-)
Type: pfam
Location: 198408 - 199334 (-)
Gene ID: Rep_2197_c_48_191
Type: TC
Location: 199352 - 200074 (-)
Type: TC
Location: 199352 - 200074 (-)
Gene ID: Rep_2197_c_48_192
Type: TF
Location: 200250 - 200615 (+)
Type: TF
Location: 200250 - 200615 (+)
Gene ID: Rep_2197_c_48_193
Type: STP
Location: 200603 - 201277 (-)
Type: STP
Location: 200603 - 201277 (-)
Gene ID: Rep_2197_c_48_194
Type: TC
Location: 201279 - 205181 (-)
Type: TC
Location: 201279 - 205181 (-)
Gene ID: Rep_2197_c_48_195
Type: TC
Location: 205355 - 206533 (-)
Type: TC
Location: 205355 - 206533 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-510
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.