Cluster: Rep_2197_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2197
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2197_c_6 | Rep_2197_c_6_29 | 29530 | 31476 | + | 2.A.66.1.28 |
| pfam | Rep_2197_c_6 | Rep_2197_c_6_30 | 31575 | 31946 | + | YjbR |
| pfam | Rep_2197_c_6 | Rep_2197_c_6_31 | 31963 | 32661 | + | RNase_T | Zn_ribbon_Top1 | RNase_H_2 |
| CAZyme | Rep_2197_c_6 | Rep_2197_c_6_32 | 32713 | 34446 | + | GH5_2 |
Gene ID: Rep_2197_c_6_29
Type: TC
Location: 29530 - 31476 (+)
Type: TC
Location: 29530 - 31476 (+)
Gene ID: Rep_2197_c_6_30
Type: pfam
Location: 31575 - 31946 (+)
Type: pfam
Location: 31575 - 31946 (+)
Gene ID: Rep_2197_c_6_31
Type: pfam
Location: 31963 - 32661 (+)
Type: pfam
Location: 31963 - 32661 (+)
Gene ID: Rep_2197_c_6_32
Type: CAZyme
Location: 32713 - 34446 (+)
Type: CAZyme
Location: 32713 - 34446 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-510
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.