Cluster: Rep_2197_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2197
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2197_c_48 | Rep_2197_c_48_6 | 5201 | 6688 | - | GH13_23 |
| CAZyme | Rep_2197_c_48 | Rep_2197_c_48_7 | 6719 | 7633 | - | GT108 |
| CAZyme | Rep_2197_c_48 | Rep_2197_c_48_8 | 7678 | 8745 | - | GH130_4 |
| NULL(UNKNOWN) | Rep_2197_c_48 | Rep_2197_c_48_9 | 8766 | 10616 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_2197_c_48 | Rep_2197_c_48_10 | 10720 | 11286 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2197_c_48 | Rep_2197_c_48_11 | 11333 | 12199 | - | 3.A.1.1.11 |
| TC | Rep_2197_c_48 | Rep_2197_c_48_12 | 12284 | 13141 | - | 3.A.1.1.11 |
Gene ID: Rep_2197_c_48_6
Type: CAZyme
Location: 5201 - 6688 (-)
Type: CAZyme
Location: 5201 - 6688 (-)
Gene ID: Rep_2197_c_48_7
Type: CAZyme
Location: 6719 - 7633 (-)
Type: CAZyme
Location: 6719 - 7633 (-)
Gene ID: Rep_2197_c_48_8
Type: CAZyme
Location: 7678 - 8745 (-)
Type: CAZyme
Location: 7678 - 8745 (-)
Gene ID: Rep_2197_c_48_9
Type:
Location: 8766 - 10616 (-)
Type:
Location: 8766 - 10616 (-)
Gene ID: Rep_2197_c_48_10
Type:
Location: 10720 - 11286 (-)
Type:
Location: 10720 - 11286 (-)
Gene ID: Rep_2197_c_48_11
Type: TC
Location: 11333 - 12199 (-)
Type: TC
Location: 11333 - 12199 (-)
Gene ID: Rep_2197_c_48_12
Type: TC
Location: 12284 - 13141 (-)
Type: TC
Location: 12284 - 13141 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-510
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.