Cluster: Rep_2197_CGC16
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2197
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2197_c_39 | Rep_2197_c_39_3 | 2272 | 5403 | + | GT39 |
| CAZyme | Rep_2197_c_39 | Rep_2197_c_39_4 | 5438 | 7504 | - | GH31_4 |
| NULL(UNKNOWN) | Rep_2197_c_39 | Rep_2197_c_39_5 | 7734 | 8606 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2197_c_39 | Rep_2197_c_39_6 | 8783 | 9649 | + | DegV |
| TC | Rep_2197_c_39 | Rep_2197_c_39_7 | 9658 | 11013 | - | 2.A.66.1.33 |
| TC | Rep_2197_c_39 | Rep_2197_c_39_8 | 11144 | 12643 | - | 2.A.35.2.1 |
| pfam | Rep_2197_c_39 | Rep_2197_c_39_9 | 12655 | 13425 | - | CMD | CMD |
| TC | Rep_2197_c_39 | Rep_2197_c_39_10 | 13522 | 14199 | - | 3.A.1.125.2 |
Gene ID: Rep_2197_c_39_3
Type: CAZyme
Location: 2272 - 5403 (+)
Type: CAZyme
Location: 2272 - 5403 (+)
Gene ID: Rep_2197_c_39_4
Type: CAZyme
Location: 5438 - 7504 (-)
Type: CAZyme
Location: 5438 - 7504 (-)
Gene ID: Rep_2197_c_39_5
Type:
Location: 7734 - 8606 (+)
Type:
Location: 7734 - 8606 (+)
Gene ID: Rep_2197_c_39_6
Type: pfam
Location: 8783 - 9649 (+)
Type: pfam
Location: 8783 - 9649 (+)
Gene ID: Rep_2197_c_39_7
Type: TC
Location: 9658 - 11013 (-)
Type: TC
Location: 9658 - 11013 (-)
Gene ID: Rep_2197_c_39_8
Type: TC
Location: 11144 - 12643 (-)
Type: TC
Location: 11144 - 12643 (-)
Gene ID: Rep_2197_c_39_9
Type: pfam
Location: 12655 - 13425 (-)
Type: pfam
Location: 12655 - 13425 (-)
Gene ID: Rep_2197_c_39_10
Type: TC
Location: 13522 - 14199 (-)
Type: TC
Location: 13522 - 14199 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-510
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.